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     MODEL SELECTION                           
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  Response           CandidateSet   mod                              Fixed            Random                            varFunc df     AICc Delta_AICc     weights
1    Cover      1: random effects  mod1 response ~ Manipulation * Habitat2 ~1 | DistrictZone                               <NA>  6 366.9683  10.732589 0.003198289
2    Cover      1: random effects  mod2 response ~ Manipulation * Habitat2     ~1 | Transect                               <NA>  6 356.2357   0.000000 0.684651658
3    Cover      1: random effects  mod3 response ~ Manipulation * Habitat2        ~1 | Block                               <NA>  6 357.8713   1.635675 0.302195129
4    Cover      1: random effects  mod4 response ~ Manipulation * Habitat2              <NA>                               <NA>  5 364.6974   8.461686 0.009954925
5    Cover 2: Variance structures  mod2 response ~ Manipulation * Habitat2     ~1 | Transect                               <NA>  6 356.2357   1.947238 0.274159765
6    Cover 2: Variance structures mod12 response ~ Manipulation * Habitat2     ~1 | Transect varIdent(form = ~1 | DistrictZone) 10 354.2884   0.000000 0.725840235
MODEL SELECTED = mod2

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     MODEL SUMMARY                             
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Linear mixed-effects model fit by REML
  Data: tmp.init 
       AIC      BIC    logLik
  355.3126 370.5724 -171.6563

Random effects:
 Formula: ~1 | Transect
        (Intercept) Residual
StdDev:   0.6589605 1.355329

Fixed effects:  response ~ Manipulation * Habitat2 
                                                    Value Std.Error DF   t-value p-value
(Intercept)                                    -1.6903486 0.4098617 90 -4.124193  0.0001
ManipulationTreatment                          -0.1365177 0.3912498 90 -0.348927  0.7280
Habitat2Exposed/Mountain                       -1.1816002 0.4114219 90 -2.871992  0.0051
ManipulationTreatment:Habitat2Exposed/Mountain -0.2386638 0.5477498 90 -0.435717  0.6641
 Correlation: 
                                               (Intr) MnpltT Hb2E/M
ManipulationTreatment                          -0.477              
Habitat2Exposed/Mountain                       -0.505  0.475       
ManipulationTreatment:Habitat2Exposed/Mountain  0.341 -0.714 -0.666

Standardized Within-Group Residuals:
        Min          Q1         Med          Q3         Max 
-3.10944998 -0.40563709  0.09992384  0.58986158  1.98719771 

Number of Observations: 98
Number of Groups: 5 


R-SQUARED
  Response   family     link method  Marginal Conditional
1 response gaussian identity   none 0.1646762   0.3243848


R-SQUARED NAIVE
[1] "0.347"
ANOVA TABLE
                      numDF denDF  F-value p-value
(Intercept)               1    90 54.44820  <.0001
Manipulation              1    90  0.88976  0.3481
Habitat2                  1    90 17.95475  0.0001
Manipulation:Habitat2     1    90  0.18985  0.6641


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     95% CI                                    
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  Response                         Type                                      Parameter      lower       est.      upper
1    Cover               Fixed effects:                                    (Intercept) -2.5046103 -1.6903486 -0.8760868
2    Cover               Fixed effects:                          ManipulationTreatment -0.9138038 -0.1365177  0.6407684
3    Cover               Fixed effects:                       Habitat2Exposed/Mountain -1.9989616 -1.1816002 -0.3642388
4    Cover               Fixed effects: ManipulationTreatment:Habitat2Exposed/Mountain -1.3268644 -0.2386638  0.8495367
5    Cover              Random Effects:                                       Transect  0.2852502  0.6589605  1.5222736
6    Cover Within-group standard error:                                          sigma  1.1713213  1.3553292  1.5682438


