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Dataset title: Data för: "Spatial evidence for carcinoma in situ (CIS) as an entity in human papillomavirus (HPV)-associated tonsillar squamous cell carcinoma (TSCC)"


Creators: Anders Näsman

Responsible organization: Karolinska Institutet

Description: Spatial transcriptomics (10x Visium) on HPV-associated TSCC, cervical and HPV-independent oral cancer cases on morphological normal, dysplastic and invasive epithelium. Files included are:

- histpopathological annotations
- spatial data/images as a zip-file
- filtered_feautre_bc_matrix.h5-file per sample	

File list:
CaseA_filtered_feature_bc_matrix.h5
Annotations_CaseA
CaseA_spatial.zip
CaseB_filtered_feature_bc_matrix.h5
Annotations_CaseB
CaseB_spatial.zip
CaseC_filtered_feature_bc_matrix.h5
Annotations_CaseC
CaseC_spatial.zip
CaseD_filtered_feature_bc_matrix.h5
Annotations_CaseD
CaseD_spatial.zip
CaseE_filtered_feature_bc_matrix.h5
Annotations_CaseE
CaseE_spatial.zip
CaseF_filtered_feature_bc_matrix.h5
Annotations_CaseF
CaseF_spatial.zip
CaseG_filtered_feature_bc_mCatrix.h5
Annotations_CaseG
CaseG_spatial.zip
CaseH_filtered_feature_bc_matrix.h5
Annotations_CaseH
CaseH_spatial.zip

See the Researchdata.se catalogue entry for this dataset for compete metadata, including the dataset description, recommended citation, contact information and information about how to obtain the dataset.
