2026-10-13 https://api.researchdata.se/oai-pmh

oai:researchdata.se:2025-328/1 2025-12-04 subject:ssif:10502 subject:ssif:10611 subject:ssif:105 subject:ssif:106 subject:ssif:1 principal:slug:university-of-gothenburg

info:eu-repo/semantics/other http://purl.org/dc/dcmitype/Dataset https://doi.org/10.5878/zf1c-vz95 Data for: Impacts of large herbivores on mycorrhizal fungal communities across the Arctic Data för: Impacts of large herbivores on mycorrhizal fungal communities across the Arctic https://orcid.org/0000-0001-8345-3141 https://orcid.org/0000-0002-6795-4349 https://orcid.org/0000-0003-3522-7363 https://orcid.org/0000-0002-7003-5941 https://orcid.org/0000-0002-6847-4099 https://orcid.org/0000-0003-4384-5014 https://orcid.org/0000-0002-8120-5248 https://orcid.org/0000-0001-5151-3947 https://orcid.org/0000-0003-4347-4444 https://orcid.org/0000-0002-9312-7910 https://orcid.org/0000-0002-4764-7691 https://orcid.org/0000-0003-3804-7077 Oula Kalttopää https://orcid.org/0000-0002-4060-0110 https://orcid.org/0000-0002-9391-2775 https://orcid.org/0000-0002-6943-1218 https://orcid.org/0009-0000-7544-5192 https://orcid.org/0000-0002-8373-336X https://orcid.org/0000-0002-1521-3856 https://orcid.org/0000-0001-5506-3824 https://orcid.org/0009-0003-2101-7709 https://orcid.org/0000-0001-5947-839X https://orcid.org/0000-0002-7209-6078 https://orcid.org/0000-0002-3409-8881 https://orcid.org/0000-0002-3580-8603 https://orcid.org/0000-0001-7346-666X Environmental Sciences Miljövetenskap Ecology Ekologi Data deposited in association with article to be published in the journal: Ecography. Fungal DNA was extracted from soil samples collected at herbivore exclosure experiments in 15 sites around the Arctic to evaluate the impact of large mammalian herbivores on mycorrhizal fungal communities. The data includes DNA sequence reads amplified using ITS1m-LR5 and SSU515fngs-AML2 long-read primer pairs targeting general fungal sequences and arbuscular mycorrhizae, respectively. Sequences were taxonomically assigned through the UNITE database using PlutoF, and the MaarjAM database and assigned to fungal guild using FUNguild. The pipeline from trimmed, demultiplexed sequence reads to taxonomic and functional assignment is included in the Rscript "EcographySubmission_SynthesisScript.R". Soil properties, date of exclosure establishment, and general metadata is included in the file "MetaData.csv", and percent plant functional type cover is included for 11 sites in the file "Cover_data.csv". Raw sequence reads were deposited in the Sequence Read Archive (SRA) under the title "Impacts of large herbivores on mycorrhizal fungal communities across the Arctic". Data deponerade i samband med artikel som ska publiceras i tidskriften Ecography. Svamp-DNA extraherades från jordprover insamlade vid betesfria experiment på 15 platser runt Arktis för att utvärdera effekten av stora däggdjursbetare på mykorrhizasvampsamhällen. Datan inkluderar DNA-sekvensläsningar som amplifierats med primerparen ITS1m-LR5 och SSU515fngs-AML2 för långläsning, vilka riktar sig mot generella svampsekvenser respektive arbuskulära mykorrhizor. Sekvenserna har taxonomiskt tilldelats via UNITE-databasen med PlutoF samt MaarjAM-databasen och har klassificerats i svampgillen med hjälp av FUNguild. Arbetsflödet från trimmade, demultiplexerade sekvensläsningar till taxonomisk och funktionell tilldelning finns i R-skriptet "EcographySubmission_SynthesisScript.R". Jordegenskaper, datum för etablering av betesfria områden och generella metadata finns i filen "MetaData.csv", och procentuell täckning av växtfunktionella typer finns för 11 platser i filen "Cover_data.csv". Råa sekvensläsningar har deponerats i Sequence Read Archive (SRA) under titeln "Impacts of large herbivores on mycorrhizal fungal communities across the Arctic". info:eu-repo/semantics/openAccess SE FI IS CA RU US University of Gothenburg Göteborgs universitet 2025-12-04T14:31:06.790297Z eng