2026-10-10 https://api.researchdata.se/oai-pmh

oai:researchdata.se:doi-10-17044-scilifelab-25836238/0 2024-05-23 subject:ssif:3 subject:ssif:10609 subject:ssif:106 subject:ssif:1 principal:slug:uppsala-university

info:eu-repo/semantics/other http://purl.org/dc/dcmitype/Dataset https://doi.org/10.17044/SCILIFELAB.25836238 Allel-specific read counts for sprat population samples used in "Limited parallelism in genetic adaptation to brackish water bodies in European sprat and Atlantic herring" https://orcid.org/0000-0002-7372-9076 María Quintela François Besnier Qiaoling Deng https://orcid.org/0000-0003-1543-8112 Cecilie Kvamme Dorte Bekkevold Mai-Britt Mosbech Ignas Bunikis Roger Lille-Langøy Iole Leonori https://orcid.org/0000-0002-9081-9663 https://orcid.org/0000-0002-1006-170X https://orcid.org/0000-0002-4085-6968 Medical and Health Sciences Medicin och hälsovetenskap Genetics and Genomics Genetik och genomik Biological Sciences Biologi "Sprat_DeDup_v2_HiC.fasta.gz" contians the draft genome used in the study, in FASTA format. It is the version upon the SNPs (single nucleotide polymorphisms) described have been called. "Sprat_pool_AD_DeDup_v2_PASS.txt.gz" contains tab-separated allele counts, as output using the "--counts" option in vcftools, from pool re-sequencting of the samples used in the study. Please see the corresponding supplementary information for sample codes etc. These counts underly the frequencies used throughout the study. https://creativecommons.org/licenses/by/4.0/ Uppsala University Uppsala universitet 2024-05-23T00:00:00Z