2026-10-10 https://api.researchdata.se/oai-pmh

oai:researchdata.se:doi-10-17045-sthlmuni-26164570/0 2025-07-21 subject:ssif:106 subject:ssif:1 principal:slug:stockholm-university

info:eu-repo/semantics/other http://purl.org/dc/dcmitype/Dataset https://doi.org/10.17045/STHLMUNI.26164570 X-ray microCT lizard brain data and labels. Trained network using Biomedisa with different number of training datasets. https://orcid.org/0000-0002-7258-002X Yulia Dragunova https://orcid.org/0000-0001-5592-8963 Biological Sciences Biologi 28_pbo24_100kV9WLE2Obj0p4xBin2t1sP801_recon.zip: X-ray tomography data of a lizard head (Podarcis bocagei) using Zeiss Xradia Versa 520 at Stockholm University Brain Imaging Center (SUBIC). SegmFromDLalgorithm.zip: X-ray microCT (microcomputed tomography) data of lizard heads, cropped down to brain part, and the corresponding labels of brain regions segmented by deep learning algorithm. SegmForDLmanual.zip: X-ray microCT data of lizard heads, cropped down to brain part, and the corresponding labels of brain regions segmented semi-manually used as training dataset for deep learning. 06_recon.zip: an example of original X-ray microCT data of a lizard head before cropping. The trained networks below can be used in Biomedisa https://biomedisa.info : NetworkTrainedWith5data.tar.h5: trained network using 5 datasets NetworkTrainedWith7data.tar.h5: trained network using 7 datasets NetworkTrainedWith9data.tar.h5: trained network using 9 datasets NetworkTrainedWith11data.tar.h5: trained network using 11 datasets https://creativecommons.org/licenses/by-nc/4.0/ Stockholm University Stockholms universitet 2025-07-21T00:00:00Z