2026-10-14 https://api.researchdata.se/oai-pmh

oai:researchdata.se:doi-10-5281-zenodo-8308137/0 2023-11-20 subject:ssif:10606 subject:ssif:106 subject:ssif:1 principal:slug:royal-institute-of-technology

info:eu-repo/semantics/other http://purl.org/dc/dcmitype/Dataset https://doi.org/10.5281/zenodo.8308137 Spatial metatranscriptomics resolves host-bacteria-fungi interactomes, Source Data https://orcid.org/0000-0003-4731-6857 https://orcid.org/0000-0002-4722-9465 https://orcid.org/0000-0002-5079-4684 Carlos, Vanessa https://orcid.org/0000-0001-7970-1595 https://orcid.org/0000-0002-2114-7963 https://orcid.org/0000-0003-0738-1574 Microbiology Mikrobiologi Source Data for a publication: Spatial metatranscriptomics resolves host-bacteria-fungi interactomes.  Includes the data sets to generate the results.  Contains five different experiment types: - Pst  bacterial infiltration experiment - Enrichment experiment with different array types - Comparison between SmT vs. Amp-seq - Outdoor-grown leaf experiments - Sterile leaf experiment For each of the experiments are included (if generated, see the README file): - Gene count matrices - Microbial taxa count matrices - Bright field images - Alignment files (Spot files) - Putative microbial reads and related probe information - Data for enrichment analysis - Fluorescent images and corresponding fluorescent values info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/ Royal Institute of Technology Kungliga Tekniska högskolan 2023-11-20T00:00:00Z eng